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2000 Pacific Division Meeting Abstracts
(Joint with Canadian Phytopathological Society)
June 18-21, 2000 - Victoria, BC, Canada
Posted online August 7, 2000
Effect of paclobutrazol on growth, yield and anatomical structure of
peanut plant infected with pod and root rot pathogens. M. E. Abdalla.
Department of Plant Pathology, Faculty of Agric., Mansoura University,
EL-Mansoura 35516, Egypt. Publication no. P-2000-0001-PCA.
Paclobutrazol (PBz), a triazole compound was applied to peanut at 250
and 500 ppm. PBz decreased plant height but increased shoot dry weight,
number of branches and pegs per plant, 100 pod weight and 100 seed
weight(g). Soil infested with either Fusarium solani or Rhizoctonia
solani reduced all above mentioned parameters. R. solani was
more virulent than F. solani on plant growth and yield. Within
treatments of interaction between PBz and each pathogen, the highest
reduction of disease incidence was found in plants grown in infested plots
and received 500 ppm of PBz followed by 250 ppm level. Anatomically, the
most striking changes occurred in the infected stem and carpophore were
complete destruction of the epidermis, plasmolysis in the cortex and
degradation of the primary cell walls. Also, breakdown of cell component
was found in some regions of pod shell and the cotyledons.
Tritrophic interactions in a biological control system.
Y.-S. Bae and G. R. Knudsen. Publication no. P-2000-0002-PCA.
A fungivorous nematode, Aphelenchoides sp., was isolated by
baiting field soil with mycelium of Trichoderma harzianum ThzID1,
and subsequently was maintained on agar cultures of the fungus.
Interactions between the nematode and the GFP transformant ThzID1-M3 were
investigated using both heat-treated (80 C, 30 min) and untreated field
soil; ThzID1-M3 was identified in soil by epifluorescence microscopy. When
ThzID1-M3 was added to soil as an alginate pellet formulation, addition of
the nematode (10 per g) significantly reduced both radial growth and
recoverable populations of the fungus; this effect was greater in
heat-treated soil. Addition of ThzID1-M3 to soil pre-treated with the
nematode (10 per g) stimulated nematode population growth for
approximately 10-20 days, whereas nematode populations decreased in the
absence of added Trichoderma. Addition of ThzID1-M3 to untreated
soil also resulted in an increase in numbers of indigenous nematodes. When
sclerotia of Sclerotinia sclerotiorum were added to soil (10 per
200 g) with ThzID1-M3 (40 pellets per 200 g), addition of Aphelenchoides
sp. reduced the number of sclerotia colonized by ThzID1-M3. These results
suggest that fungivorous nematodes may be a significant biotic constraint
on activity of biocontrol fungi in the field.
Genetic markers for identification, estimation of infection, and
risk assessment of Chondrostereum purpureum, a biological control
agent for forest weeds. E. M. BECKER (1), R. L. Hahn (1), P.de la
Bastide (1), S. F. Shamoun (2), and W. E. Hintz. Publication no.
P-2000-0003-PCA.
The indigenous fungus Chondrostereum purpureum is a promising
biocontrol agent for several deciduous forest weeds of reforestation sites
and utility rights-of-way. The formulated fungus is applied as a stump
treatment to target weeds, and subsequently suppresses vegetative
re-sprouting. We have developed a series of molecular markers for C.
purpureum. An isolate-specific primer pair was developed according to
a region (SCAR) of a RAPD fragment, which amplifies repetitive polymorphic
DNA from C. purpureum. Banding patterns produced using these
primers are distinctive and allow individual genotypes to be
distinguished. To support the research and development of this biocontrol
agent, we have successfully applied these genetic markers to the
investigation of several aspects of this system including: the population
diversity and dynamics (gene flow) of the fungus, the frequency of
infection of treated stumps, the environmental fate and persistance of
specific biocontrol isolates, and the genetic stability of the formulated
product. These studies have furthermore enabled an assessment of the
relative risks of deployment of one genetic individual of C. purpureum
as a biocontrol agent of forest weeds in North America.
Studies on bacterial antagonists of post harvest pathogens of apple.
K. E. BEDFORD (1), P. L. Sholberg (1), and S. L. Probert (1). (1) Pacific
Agri-Food Research Centre, Agriculture and Agri-Food Canada, Summerland,
BC V0H 1Z0. Publication no. P-2000-0004-PCA.
A series of post harvest experiments on apple, testing various
bacterial isolates as antagonists, against the post harvest pathogens Penicillium
expansum and Botrytis cinerea were conducted in 1999. One of
the bacterial strains, a Pseudomonas sp. (1100-6) proved
consistently effective against each of the post harvest pathogens on
several different apple cultivars. The 1100-6 strain significantly reduced
or completely inhibited post harvest rot at 5°C and 20°C, in air storage
and under controlled atmospheric conditions. The antagonist was effective
at various concentrations (10(^4), 10(^5), 10(^6) CFU/ml) against
concentrations of the post harvest pathogens of 10(^5) and 10(^6)
conidia/ml and could be applied as a dip. A period of time (24 h) after
dip or wound inoculation with the antagonist before challenging with the
pathogen greatly increased the effectiveness of the antagonist. Larger
scale storage experiments using 1100-6 were established in the autumn of
1999.
Monitoring Aspergillus flavus AF36 and S strain incidence in
the Desert Southwest. D. M. BIGELOW (1), T. V. Orum (1), P. J. Cotty
(2), and M. R. Nelson (1). (1) Department of Plant Pathology, University
of Arizona, Tucson, AZ 85721; (2) Southern Regional Research Center,
Agricultural Research Service, U.S. Department of Agriculture, New
Orleans, LA 70179. Publication no. P-2000-0005-PCA.
Aflatoxin contamination of cottonseed causes significant economic loss
for Arizona farmers because it prevents access to premium markets for
their crop. Aspergillus flavus, the cause of aflatoxin
contamination of cottonseed, can be divided into the S and L strains based
on sclerotial morphology. S strain isolates are highly toxigenic whereas L
strain isolates are variable in aflatoxin production. Some L strain A.
flavus isolates produce no aflatoxin. An atoxigenic L strain of A.
flavus (AF36), occurring naturally in Arizona, is currently part of an
aflatoxin management program. In 1999, ten sentinel sites distant from
AF36 treatment areas were chosen to develop baseline data on statewide
AF36 incidence. Over 1200 isolates were characterized as S or L strain.
The L strain isolates were tested for vegetative compatibility to AF36.
AF36 was detected at eight sentinel sites from Brawley, CA to Safford, AZ
(540 km). AF36 incidence in individual fields ranged from 0 to 7.3%. S
strain incidence at the sentinel sites was combined with data from 1998 to
develop a statewide map estimating S strain incidence prior to initiation
of the management program. These data suggest that S strain incidence is
inversely correlated with elevation in Arizona.
Phenazine biosynthesis in Pseudomonas aureofaciens is
regulated by RpoS in a nutrient-dependent manner. F. M. BLACHERE and
L. S. Pierson III. Department of Plant Pathology, University of Arizona,
Tucson, Arizona, 85721. Publication no. P-2000-0006-PCA.
Pseudomonas aureofaciens strain 30-84 is a
rhizosphere-colonizing biocontrol bacterium. Production of phenazine
antibiotics by strain 30-84 suppresses the fungus Gaeumannomyces
graminis var. tritici, the causal agent of take-all in wheat.
Induction of phenazine gene expression is dependent upon a complex signal
transduction cascade, including a two-component sensory system, an AHL
quorum sensing system, and the stationary sigma factor RpoS. Mutation of rpoS
results in differential production of the AHL signal required for
phenazine gene expression. Under nutrient-limited conditions, AHL signal
and phenazines are not produced in a rpoS mutant. The addition of
exogenous AHL restores phenazine expression. Likewise, supplementation of
nutrient-limited conditions with casamino acids or the AHL intermediate
AdoMet restores phenazine gene expression. These results suggest a model
in which RpoS affects substrate flow to the AHL synthase thus altering the
levels of AHL signal and phenazine expression.
Spur blight as a foliar disease on fruiting canes of red raspberry.
P. R. BRISTOW, G. E. Windom, and G. W. Menzies. Department of Plant
Pathology, Washington State University, Puyallup 98371. Publication no.
P-2000-0007-PCA.
Spur blight (Didymella applanata) on red raspberry normally
causes diagnostic wedge-shaped lesions on leaves of primocanes and cane
lesions around nodes with infected leaves. In 1997 and 1998, years with
high rainfall in May and June, the fungus caused leaf-spotting and
defoliation of leaves on laterals of fruiting canes. Spots began (late
May) as scattered yellow areas associated with veins. The center of the
spots became necrotic as the spots enlarged. Lesions coalesced and
defoliation started by mid June; a time when green berries are a strong
sink for photosynthates. Leaf damage was markedly reduced when plants were
protected by a mixture of Captan + Rovral between early May and mid June,
but not afterward. Ascospores of D. applanata were trapped between
mid April and late July. Damage to leaves on laterals is usually not seen
because fungicides applied during May and June for control of Botrytis
fruit rot also protect leaves from D. applanata.
Nuclear condition and conjugation of basidiospores as taxonomic
characters in Tilletia. L. M. CARRIS and P. M. Gray. Department
of Plant Pathology, Washington State University, Pullman, WA 99164-6430.
Publication no. P-2000-0008-PCA.
Identification of Tilletia species traditionally has relied on
teliospore morphology and host genus. Specimens with spores of similar
size, color and ornamentation infecting hosts in the same genus are
considered one species. However, taxonomically informative characters also
are found in germinating teliospores and primary basidiospores, in
particular basidiospore shape, size, conjugation and nuclear condition. We
studied collections of T. lolii infecting different species of Lolium
and identified two distinct taxa based on differences in basidiospore
morphology and conjugation. An unusual nuclear variant was found in two
Australian collections from L. perenne. Teliospores germinated to
form 24-40 uninucleate, non-conjugating basidiospores, and colonies
derived from single basidiospores formed teliospores in culture. Lolium
plants inoculated with cultures derived from single basidiospores
developed sori in infected florets. The implications of variations in
nuclear behavior for the biology and systematics of Tilletia and
allied genera will be discussed.
Influence of K/N and pH levels on resistance of two greenhouse
pepper cultivars to Fusarium solani and Erwinia carotovora
pv. carotovora. R. F. CERKAUSKAS and J. Brown. Agriculture
& Agri-Food Canada, Greenhouse & Processing Crops Research Centre,
Harrow, Ontario, N0R 1G0. Publication no. P-2000-0009-PCA.
The effect of three K:N ratios at 300:300, 400:200, and 480:120 (ppm),
and three pH levels (5,6,7) on disease development of two pepper cvs.
(Cubico and Edison) to Fusarium solani (F.s.) and Erwinia
carotovora pv. carotovora (E.c.c.) was investigated in two
separate trials in a double-poly greenhouse using an open rockwool slab
system. The other constituents of the base feed were: P=50, Ca=150, Mg=50,
Fe=1.2, Mn=0.65, and S=150 to 400, with S=200 ppm for the pH trial. Three
pepper plants/m2 each with 2 stems, and 3 pepper plants per rockwool slab
were used. Each 132 day-old (approx.) plant in the slab was inoculated at
the second node above each of the two main stems with one of the
treatments: F.s., E.c.c., or control-check. External and internal stem
discolouration were measured 20 and 52 days after inoculation,
respectively; visual symptoms were then assessed (0 = healthy, 5 = dead
branch). There was no suppression of F.s. or E.c.c. symptoms by K:N or pH
levels. Symptoms due to F.s. were more severe than those of E.c.c. in both
cases. Cultivar yield response to K:N and pH levels was generally similar.
K:N at 480:120 ppm gave the highest yield. The influence of Ca levels
(100, 200, 300 ppm) will also be discussed.
Bacterial stem and peduncle canker of greenhouse pepper. R. F.
CERKAUSKAS and J. Brown. Agriculture & Agri-Food Canada, Greenhouse
& Processing Crops Research Centre, Harrow, Ontario, N0R 1G0.
Publication no. P-2000-0010-PCA.
Disease losses to Erwinia carotovora pv. carotovora
(E.c.c.),were 12% and 20% in 1996 and 1998, respectively, in greenhouse
peppers at St. David's, Ont. The disease was also observed on field
peppers near Harrow in 1996-97. Symptoms consisted of dark brown to black
cankers on the stem nodes and fruit peduncles, dark discolouration of the
internal stem tissue, and internal breakdown of the pith, and stem
hollowness in some cases. Extensive bacteriological tests (Ref. Schaad,
1988) were conducted with all isolates to verify identity. Reactions of
greenhouse and field strains were generally similar with a few exceptions.
Spraying, spraying + (wounding or rubbing), and stem inoculation were
conducted with the isolates. 'Early California Wonder' pepper plants that
were wounded and then sprayed with a bacterial suspension consistently
showed extensive collapse of stems and death of plants 4 days later
regardless of isolate used. 'Trust' tomato plants showed a similar
response in some cases or internal brown stem discolouration and
hollowness in other cases. Spraying or spraying + rubbing of leaves with
the isolates also caused extensive disease development but fewer plants
were affected. Greenhouse and field isolates caused similar symptoms on
both hosts. This is the first report in Canada.
Susceptibility of intermountain provenances of Douglas-fir to
Rhabdocline needle cast. G. A. CHASTAGNER. Department of Plant
Pathology, Washington State University, Puyallup, WA 98371. Publication
no. P-2000-0011-PCA.
Intermountain (IM) forms of Douglas-fir have better postharvest
moisture retention and are less likely to be injured by exposure to
subfreezing temperatures than the coastal types traditionally grown as
Christmas trees in the Pacific Northwest (PNW). However, planting IM
Douglas-fir in the coastal areas of the PNW is currently not recommended
because of their high susceptibility to Rhabdocline needle cast. During
the past three years, needle cast severity was rated (0 to 100 scale) on
trees in a replicated 1991 planting of IM Douglas-fir at WSU-Puyallup. In
1997, needle cast ratings ranged from 0.8 to 70. Trees from the Cibola
National Forest (NF) had significantly higher needle cast ratings (70.0)
than trees from Carson NF (17.3), Coconino NF (15.7), Rio Grande NF (5.0)
and Upper Clearwater, ID (0.8). Trees from the Apache NF (51.4), San
Isabel NF (32.3), two collections representing the Lincoln NF (25.4-30.2)
and the Santa Fe NF (21.3) had intermediate levels of needle cast.
Applications of chlorothalonil to the new growth in the spring have been
highly effective in controlling needle cast on all of the provenances.
Use of the RGAP markers to detect stripe rust resistance genes in
wheat germplasm. X. M. CHEN, Z. X. Shi, and R. F. Line. USDA-ARS and
Washington State University, Pullman, WA 99164. Publication no.
P-2000-0012-PCA.
The resistance gene analog polymorphism (RGAP) technique was used to
identify markers for wheat resistance to stripe rust (Puccinia
striiformis f. sp. tritici). Unique RGAP markers were
identified for near isogenic lines with Yr1, Yr5, Yr7,
Yr8, Yr9, Yr10, Yr15, Yr17, and YrA.
Co-segregation of markers with Yr9 was confirmed with BC(7):F(2)
and BC(7):F(3) generations of the cross between the Yr9 line and
the recurrent parent. The location of Yr9 on chromosome 1B was
confirmed by analyzing the nulli-tetrasomic and ditelosomic lines of
Chinese Spring with co-dominant RGAP markers. The Yr9 markers were
also detected in five wheat cultivars that have Yr9. To map
quantitative trait loci (QTL) for durable, high-temperature, adult-plant
(HTAP) resistance, the F(7) lines of Stephens/Michigan Amber were
evaluated for resistance in field plots. Molecular markers were identified
by amplifying the F(8) DNA with RGA primers. Resistance QTL that explained
the most of variation were mapped on a linkage group consisting of 10 RGAP
markers. These results show that the RGAP technique can be used to
identify resistance genes in germplasm and may be used to combine
resistance genes.
Powdery mildew induced expression of a peroxidase gene in Triticum
aestivum L. D. W. Cheng, K. Armstrong, and G. Fedak.
Eastern Cereal and Oilseed Research Center Agriculture and Agri-Food
Canada, 960 Carling Avenue, Ottawa, Ontario K1A 0C6, Canada. Publication
no. P-2000-0013-PCA.
Peroxidases are believed to be involved in several plant defense
responses. Our previous research indicated that the induction of plant
peroxidases appears to be an early event in these responses. Recently, we
cloned a set of peroxidase (pxc) alleles from two wheat (Triticum
aestivum L.) cultivars, Ac Dexter (resistant) and Absolvent
(susceptible) to the powdery mildew pathogen (Erysiphe graminis f.
sp.tritici). The molecular structures of the pxc alleles are highly
diverged in the promoter region, but highly conserved in the ORF region
which contains a signal peptide sequence at the 5' end of the coding
domain, and 3 exons and 2 introns in almost the same position. Upon
inoculation of one-month-old plants with a spore suspension of the powdery
mildew pathogen and physical treatment of the leaves by wounding, the
temporal relationship of the splicing/editing of the pxc gene and the
resistance to the pathogen was examined in pxc transcripts by sequence
analysis of cDNAs derived from leaves. It has been shown that the powdery
mildew pathogen induced the specific expression of the pxc gene in the
leaves of both cultivars. However, only the larger size transcripts
induced by the pathogen in the resistant cultivar showed correct splicing
and editing and produced a functional translation product. These results
indicate that the peroxidase gene is inducible upon inoculation of plants
with powdery mildew pathogen, pre-mRNA splicing and editing is required to
produce structurally correct and functionally active peroxidase proteins
in the resistance plants of common wheat.
Dehydrated garlic powder used to reduce Sclerotium cepivorum
in field soil. F. CROWE (1), M. Davis (2), J. Nunez (3), R. Smith (4),
and T. Darnell (5). (1) Oregon St. Univ., Madras OR 97741, (2) Univ. of
California, Davis CA 95616, (3) Univ. Calif. Coop. Ext., Bakersfield CA
93307, (4) UCCE, Salinas CA 93901, and (5) OSU Coop. Ext.,
Milton-Freewater 97862. Publication no. P-2000-0014-PCA.
For single applications distributed within the infested depth of soil
in large field plots, 0, 18.5, 37, 74, 111, 148, and 185 g/m(^3) of
food-grade dehydrated garlic powder (DGP) lowered populations of Sclerotium
cepivorum by 0-27, 33-77, 65-72, 92-95, 93-98, 94-98, and 100%,
respectively, when applied within the optimal range of soil temperature
and moisture for sclerotial germination. Data were composited from field
trials near Walla Walla WA (1991-92, fall applied), Bakersfield CA and
Hollister CA (1998, spring applied), and Madras OR (1999, spring applied).
As per previous reports, >5 L/H diallyl disulfide (Madras and
Bakersfield) or 200 kg/H tarped methyl bromide (Bakersfield) reduced
populations by about 98%. DGP was obtained from California processors and
used within a few months of production, but amount and composition of
germination stimulants were not assessed. For white rot control, all such
treatments should be adjusted to the depth to which sclerotia have been
tilled.
Susceptibility of five nightshade (Solanum) species to Phytophthora
infestans. L. M. Dandurand and C. V. Eberlein. Publication
no. P-2000-0015-PCA.
Susceptibility of leaves and berries of six nightshade species to
infection by Phytophthora infestans was tested. American black (S.
americanum Mill) and eastern black (S. ptycanthum Dun.)
nightshade were resistant to late blight infection. However, two biotypes
of hairy (S. sarrachoides Sendtner) nightshade (smooth- and
wavy-edged leaf), cutleaf (S. triflorum Nutt.), and bitter (S.
dulcamara L.) nightshade were susceptible. Survival of the fungus in
susceptible species was tested under various environmental conditions. The
fungus survived for at least two weeks in both hairy nightshade biotypes
when plant material was kept in soil at a temperature of 20°C. However,
the fungus survived 48 hrs at -15°C only in the smooth-leaf hairy
nightshade biotype. In the laboratory, oospores of the pathogen were
formed in the two hairy nightshade biotypes, cutleaf nightshade, and
'Russet Burbank' potato, but not in American black, bitter, or eastern
black nightshade.
The application of in vitro culture of western hemlock dwarf
mistletoe to studies on biological control. S. J. DEEKS (1), S. F.
Shamoun (2) and Z. K. Punja (1). (1) Dept. of Biological Sciences, Simon
Fraser University, Burnaby, BC V5A 1S6; (2) Canadian Forest Service,
Pacific Forestry Centre, Victoria, BC V8Z 1M5. Publication no.
P-2000-0016-PCA.
Western hemlock dwarf mistletoe (Arceuthobium tsugense subsp. tsugense)
is a parasitic plant that attacks western hemlock (Tsuga heterophylla)
on the west coast of British Columbia. A novel study on the in vitro
culture of this species was conducted, evaluating the effects of media,
temperatures, presence or absence of light, and plant growth regulators on
the production of radicles, holdfasts, and callus. Germinated seeds and
calli were used in an in vitro screening method to test two potential
biocontrol fungi, namely Cylindrocarpon cylindroides and Colletotrichum
gloeosporioides. Infected mistletoe tissues were examined by light
microscopy, and the process of pathogenesis was investigated. Cushion
development, cell wall degradation, and inter and intracellular
colonization were evident for germinated seeds, and growth of dwarf
mistletoe callus was reduced. The in vitro screening method was useful to
elucidate the host-pathogen interactions and determine the pathogenicity
of the biocontrol fungi.
Detecting expression of a beet leafhopper transmitted virescence
agent Phytoplasma plasmid with sequence specific oligonucleotides using
RT-PCR. S. Diaz de Leon and M. Shaw. Department of Life
Sciences, New Mexico Highlands University, Las Vegas, New Mexico 87701,
USA. Publication no. P-2000-0017-PCA.
The Beet Leafhopper Transmitted Virescence Agent (BLTVA) Phytoplasma
has been molecularly characterized to be distinguishably different from
other phytoplasma strains (Seemüller, 1998). In efforts to further
characterize the BLTVA phytoplasma, previously cloned BLTVA plasmid DNA
(Shaw, 1991) was partially sequenced and sequence-specific DNA probes were
derived. Probes were hybridized with crude nucleic acids extracted from
symptomatic BLTVA infected and uninfected periwinkle plants.
Sequence-specific PCR primers designed amplified expected sized band
products from both recombinant plasmid and from crude BLTVA infected plant
DNA as confirmed by enzyme restriction analysis. RT-PCR results using
these same primers with two BLTVA samples from different sources also
yielded consistent banding patterns. These RT-PCR products amplified with
the sequence specific primers determined that mRNA was transcribed from
the sequenced fragment.
Thus far, an 864bp region has been sequenced from one of the
recombinant BLTVA plasmids. Results of repeated sequencing reactions with
the recombinant plasmids are in agreement, however no open reading frames
(ORF) have yet been found within the sequenced regions of these clones.
The primers designed from these regions have proved successful in RT-PCR
reactions. Reproducibility of the RT-PCR product with BLTVA samples from
various sources positively affirmed the transcription of mRNA from the
sequenced BLTVA plasmid fragment. Further work will be done to determine
and compare the sizes of the mRNA transcripts detected. Sequencing of the
remainder of the fragments is ongoing.
Avocado sunblotch viroid detection using a simple PCR method. A.
Dodds, D. Mathews, and J. Heick. Department of Plant Pathology, University
of California, Riverside, CA 92521. Publication no. P-2000-0018-PCA.
We have developed a rapid, sensitive detection method based on RT-PCR
(reverse transcription polymerase chain reaction), using a simple sample
preparation method that uses filter paper strips dipped in extract and
then tranferred to PCR reaction mix. Using this method we have
re-confirmed ASBVd freedom in the main UCR avocado variety block and have
determine the ASBVd status of important trees for growers, nurserymen and
researchers. We have determined that leaves of a moderate age are optimal
for PCR testing. Leaves from a new flush of growth which have not yet
hardened off or old leaves which are nearing senescence do not give
consistent results. All parts of the leaf are satisfactory, we use a slice
of tissue from the middle of the leaves which includes a section of the
midrib. When testing individual branches of an infected tree, not all
branches tested positive. Avocado fruit itself is also a satisfactory
source of tissue and gives a strong PCR result. We have identified several
samples in which the fruit was symptomatic for ASBVd and tested positive
for it by PCR. However, the tree itself repeatedly tested negative for
ASBVd. For almost a year, monthly collections from symptomless carriers of
ASBVd have been made and analyzed by PCR. To date, no decline in the
sensitivity of detection has occurred regardless of the time of year.
Influence of soil nitrogen and mycorrhizae on Pacific madrone
decline. M. ELLIOTT, E. Cline, and R. L. Edmonds. College of Forest
Resources, University of Washington, Seattle, WA 98195. Publication no.
P-2000-0019-PCA.
Pacific madrone (Arbutus menziesii Pursh) has been declining in
urban areas due to a canker disease caused by the fungus Nattrassia
mangiferae. Environmental stress is important in making the trees
susceptible to disease. Stress caused by high available soil nitrogen is
examined in this study. Madrones growing alone and in mixed stands with
conifers were compared with respect to tree health and soil conditions
including pH, moisture, and net nitrification. Tree health was determined
by percent foliage relative to diameter and amount of disease from canker,
dieback, and root rot. Root tips of madrones were examined for
mycorrhizae. Madrones growing in mixed stands had more mycorrhizal
morphotypes. There was a trend towards lower available nitrogen in the
soil in mixed stands. Unhealthy madrones growing with conifers had the
lowest soil pH, and more Armillaria root disease. Soils near
unhealthy madrones had higher net nitrification rates than did soils near
healthy madrones. It is possible that increased nitrogen in the soil
reduces mycorrhizal colonization of roots and negatively affects tree
health.
Detection and quantification of metalaxyl using the MIDI Microbial
Identification System. J. J. FARRAR and R. M. Davis. Department of
Plant Pathology, University of California, Davis, CA 95616. Publication
no. P-2000-0020-PCA.
Metalaxyl is widely used for control of cavity spot of carrot. We are
investigating the degradation of metalaxyl in carrot field soils and
needed an efficient quantification method. We examined the possibility of
using the MIDI-GC Microbial Identification System version 6.0 to detect
and quantify metalaxyl levels in soil and plant tissue. Samples included
dilutions (0 to 150 ppm ai) of technical metalaxyl and Ridomil Gold EC
(Ridomil) in methanol, soil spiked with Ridomil (0 to 300 ppm ai), and
cotton seed treated with Ridomil (0, 0.002, and 0.02 ml ai/ 200 seeds)
prior to germination. Soil and cotton radicle samples were dried in a 70°C
oven, extracted in methanol, evaporated in a fume hood, and reconstituted
in hexane. Samples were run using the aerobe subprogram of the MIDI.
Technical metalaxyl dilutions gave a single peak at 10.8 minutes. The 10.8
minute peak was the largest peak in the Ridomil dilutions and was present
in the soil and cotton radicle samples. The relationship between area
under the 10.8 minute peak and concentration was linear from 5 to 150 ppm
for technical metalaxyl and Ridomil and from 5 to 100 ppm for spiked soil
samples.
Evaluation of detection methods for Colletotrichum acutatum
in anthracnose-infected almond tissues. H. FÖRSTER and J. E.
Adaskaveg. Dept. of Plant Pathology, Univ. of California, Riverside, CA
92521. Publication no. P-2000-0021-PCA.
Almond anthracnose, caused by C. acutatum, has become a major
problem for California almond growers. Symptoms of the disease on blossoms
are easily confused with brown rot blossom blight or jacket rot. Leaf and
fruit symptoms can also be confused with other diseases. For the accurate
diagnosis of anthracnose-infected tissues we evaluated a commercially
available ELISA kit for the detection of Colletotrichum spp. and a
PCR amplification method using specific primers. Results of these two
molecular assays were compared with results obtained from isolations and
fungal identification based on morphology, assuming that the isolation
results were 100% accurate. Symptomatic almond tissues were collected
throughout the growing season and the identification methods were
performed on split-sample aliquots. Our results indicated that the ELISA
and PCR methods were accurate for 83% or 74% of the samples, respectively.
Additionally, the ELISA method is quick, cost-effective, and requires
little technical expertise or equipment. Thus, this assay is a promising
alternative for identification and monitoring of this almond disease.
Latent pine wilt infection as a disease source in consecutive years.
K. FUTAI. Publication no. P-2000-0022-PCA.
Japanese red pine trees at the Kamigamo Experimental Station, Kyoto
University Forests, 9 km north of Kyoto City, have been devastated by pine
wilt disease since the end of the 1960s. I mapped 178 red pines which have
survived in a 1.8 ha area, then overlaid the distribution maps of pines
trees killed during the preceding10 years in the area. The maps show that
810 Japanese red pines were present in 1985, i.e. pine wilt disease has
killed almost 80% of the pines. The epidemic nature of pine wilt spread
was examined by analyzing the spatial distribution pattern of dead trees.
Correlation between distribution of dead pine trees for all pairs of
consecutive, 2 year periods was analyzed and significant overlapping was
found between some consecutive 2-year periods. This suggests that latent
infect of trees might play an important role in recurring wilt disease in
areas where all dead pine trees (which serve as sources of infection) are
removed.
Crop rotation for management of rhizomania disease of sugarbeets.
J. J. GALLIAN and R. L. Roemer. University of Idaho, Twin Falls Research
and Extension Center, P.O. Box 1827, Twin Falls, ID 83303-1827.
Publication no. P-2000-0023-PCA.
Rhizomania is one of the most serious diseases of sugarbeets (sb)
worldwide. Currently available resistance levels alone are not sufficient
to prevent significant yield losses under severe disease conditions.
Sugarbeet yields as influenced by cultivar susceptibility and crop
rotation were measured in a 5-year study. Following a rotation with
potato-bean-barley in a field with a history of severe rhizomania, a
resistant cultivar of sb yielded 68.8 t/ha, while a susceptible cultivar
yielded only 39.7 t/ha. However, if sb followed sb, the yields were much
lower in both resistant (36.1 t/ha) and susceptible (15.7 t/ha) cultivars.
Oilseed radish, commercially used as a trapcrop for control of sb cyst
nematode, reduced rhizomania severity and increased sb yield by 8.1 t/ha
with a resistant cultivar and 7.9 t/ha with a susceptible cultivar.
Integrated disease management with resistant cultivars and proper crop
rotation can significantly reduce rhizomania impact and result in
economically acceptable yields.
Comparative sequence analysis of endochitinases of Trichoderma.
P. A. GAY (1), M. Cheng (1), E. Koch (2), and J. H. McBeath (1). (1) Plant
Pathology and Biotechnology, University of Alaska Fairbanks, Fairbanks, AK
99775; (2) Federal Biological Research Centre for Agriculture and Forestry
(BBA), Institute for Biological Control, D-64287 Damstadt, Germany.
Publication no. P-2000-0024-PCA.
The 42 kD endochitinase of Trichoderma harzianum has been
implicated as a component in the inhibition of plant pathogens. The gene
encoding for this endochitinase has been well characterized. Specific
primers corresponding to the flanking region of the 42 kD endochitinase
gene were used to amplify corresponding genes in native Alaskan, Chinese
and European Trichoderma strains. A 1.4 kilobase major
amplification product was observed in most of the Trichoderma
strains. Sequence analysis and comparison of the major amplification
product revealed greater than 90% similarity to the published sequence of
the 42 kD endochitinase gene from T. harzianum and single
nucleotide differences in the endochitinase genes between strains was
observed. Further studies are ongoing to determine if the observed single
nucleotide differences may have an effect on the amino acid sequence
resulting in a potential conformational change in the corresponding
protein.
Occurrence of brown root rot of alfalfa in the continental United
States. F. A. GRAY (1), C. R. Hollingsworth (1), and D. W. Koch (1).
(1) Department of Plant Sciences, University of Wyoming, Laramie, WY
82071-3354. Publication no. P-2000-0025-PCA.
Brown root rot (Phoma sclerotioides) was first described from
North America on alfalfa from Canada in 1933. It was found for the first
time in the continental U.S. in Wyoming in 1996, causing severe root rot
and winterkill in two-year-old or older stands of alfalfa. It was reported
from Wyoming in 1997. Pathogenicity of a Wyoming isolate of P.
sclerotioides was shown on alfalfa plants, variety Multi-plier,
following a four-month exposure period to winter conditions in Laramie,
Wyoming. Disease incidence and severity increased during a second exposure
period of seven months, the following year. In another experiment, in
which severe disease and mortality occurred following the first exposure
period of seven months, plants of the Canadian variety Peace, had
significantly less disease and greater forage yield than did plants of
Multi-plier. Current studies are focusing on isolate pathogenicity and
host resistance.
Antifungal properties of root exudates from Asparagus densiflorus.
C. Y. HE and D. Wolyn. Department of Plant Agriculture, University of
Guelph, Guelph, Ontario, N1G 2W1. Publication no. P-2000-0026-PCA.
Root exudates from Asparagus densiflorus plants exhibiting
hypersensitive cell death upon inoculations with F. oxysporum f.
sp. asparagi (FOA) were examined for antifungal properties. Poor
spore germination and germ tube growth of F. proliferatum and F.
oxysporum f. sp. asparagi, lycopersici and cyclaminis
were observed in the root diffusate of A. densiflorus, which was
pre-challenged by FOA for 24-h. No inhibition of spore germination and
growth was found for exudates from the unchallenged control plants and the
fungal germination fluid. The results suggested that inhibitory compounds
are inducible by fungal inoculations. Treatments of diffusate with
proteinase K and boiling did not affect inhibition of spore germination
and growth, suggesting inhibitory compound(s) in diffusate might be
heat-stable secondary metabolite(s).
Solanaceous hosts as sources of inoculum for late blight on potato
in the Pacific Northwest. D. Inglis, M. Derie, B. Gundersen, E.
Vestey; and, R. Ludy and M. Powelson. WSU-REU, Mount Vernon, WA 98273;
and, OSU Dept. Botany and Plant Pathology, Corvallis, OR 97331.
Publication no. P-2000-0027-PCA.
Seventeen species in 11 genera (Capsicum, Datura, Lycium,
Lycopersicon, Nicandra, Nicotiana, Petunia, Physalis, Salpiglossis,
Schizanthus, Solanum) of the Solanaceae, most of them available from
nurseries in the PNW, were evaluated for susceptibility to late blight
during 1999. Each entry of 1-10 plants, replicated 3 times, was rated
weekly for percent disease occurring naturally in the field. Excised
leaves or leaf discs of each entry also were inoculated with US-11 and
US-8 Phytophthora infestans, incubated at 18 degrees C, and lesions
evaluated for sporulation. At Mount Vernon the susceptible hosts (field
symptoms; 75-100 percent lesions sporulating with US-11 or US-8) were red
and yellow currant (L. pimpinellifolium), bittersweet (S.
dulcamara), glasnevin (S. crispum), and a potato control (S.
tuberosum). Petunia (P. hybridia) was moderately resistant
(limited/no field symptoms; 25-100 percent sporulating lesions) to both
US-11 and US-8, while butterfly flower (S. pinnatus) and Apple of
Peru (N. physalodes) were moderately resistant to US-11 and US-8,
respectively. All other hosts were resistant. Red and yellow currant,
bittersweet, Apple of Peru and potato also were susceptible to US-8 in
laboratory tests at Corvallis. Plants grown as ornamentals in the PNW may
serve as sources of inoculum for epidemics of late blight on potato.
Isolation of microsatellites from Peronospora parasitica, a
biotrophic fungal pathogen of crucifers. M. Jugmohan, P. N. Achar, J.
A. Lucas* and Keith J. Edwards*. Department of Microbiology, University of
Durban-Westville, Private Bag X54001, Durban 4000. *Department of Cell
Biology, IACR-Long Ashton Research Station, University of Bristol,
England, UK. Publication no. P-2000-0028-PCA.
Downy mildew disease caused by the fungus Peronospora parasitica
infects a wide range of cruciferous hosts including the cultivated
Brassicas. Although certain isolates may be able to infect a heterologous
host to different extents, most isolates are pathotype specific. Many
pathotypes are known viz., Brassica oleracea, B. napus, B. juncea, B.
rapa pathotypes as well as the Arabidopsis thaliana pathotype.
The relationship of the various pathotypes at the molecular level is still
unclear. The aim of the current study was to prepare a genomic DNA library
enriched for microsatellites and use the primers thus derived to assess
the molecular relatedness among isolates of P. parasitica. DNA was
extracted from isolated P005 (P1 mating type of the B. oleracea
pathotype) and used in the preparation of the library. Preparation of the
library involved a series of steps. DNA was first digested with
restriction enzymes, adapters were ligated, followed by pre-amplification
using PCR. The DNA was then denatured and microsatellites were selected by
hybridisation to prepared membranes containing bound oligonucleotides.
These were then cloned into PJV1 and then transformed into E. coli
DH5alpha competent cells. Positive colonies were selected by hybridisation
with labeled microsatellite probes and plasmids were prepared using the
Promega kit. Thereafter clones were sequenced using the ABI Prism
automated sequencing system and primers were designed. Primers were then
used to assess polymorphism among different isolates of P. parasitica.
The results indicate a high level of microsatellite sequences in P.
parasitica which is significant when comparing isolates of different
pathotypes.
Effects of dazomet rate and incorporation implement on seedling
production in forest nurseries. J. JUZWIK (1), K. W. Kromroy (1), and
D. L. Stenlund (2). (1) USDA Forest Service, North Central Research
Station, St. Paul, MN 55108; (2) MN Department of Transportation, St.
Paul, MN 55155. Publication no. P-2000-0029-PCA.
Dazomet is an alternative to methyl bromide for preplant soil
fumigation in USA forest nurseries. Uniformity and depth of incorporation
are important factors in the application of the surface applied granular
product. Trials were conducted at two nurseries using five tillage
implements (three rotary tillers, a disc cultivator and a spading machine)
and two dazomet (DAZ) rates (285 and 570 kg prod. ha-1) to determine their
effects on seedling quantity and quality. Mortality and root disease
severity ratings (DSR) of white pine seedlings were higher at the
Wisconsin nursery than the Michigan nursery. Significantly lower mortality
and DSR were found at the high DAZ rate than at the low DAZ rate for three
of the four implements after three growing seasons in Wisconsin. In
general, mortality and DSR were lowest and percentages of shippable
seedlings were highest for the spading machine for both DAZ rates. These
results support previous reports that showed the superiority of the
spading machine when the chemical fumigant must reach depths below 18 cm.
Pathogenicity of Phaeoacremonium spp. on grapevine in
California. A. Khan, C. Whiting, and W. D. Gubler, 2000. Department of
Plant pathology, University of California, One Shields Ave., Davis, CA
95616. Publication no. P-2000-0030-PCA.
Autoclaved sand was infested with a spore suspension (4×107 conidia/gm
sand) of Phaeoacremonium inflatipes, P. aleophilum and P.
chlamydosporum and single bud dormant cuttings of grapevines of cv
Chardonnay were placed in infested sand for three weeks at 27 C. Phaeoacremonium
inflatipes was isolated from 66%, P. aleophilum from 59%, and P.
chlamydosporum from 7% of the cuttings. In dormant cuttings P.
chlamydosporum, P. aleophilum and P. inflatipes
inhibited callus formation in 22%, 62%, and 72%, of the cuttings,
respectively. Dormant cuttings artificially infected by P. inflatipes,
P. aleophilum and P. chlamydosporum, were planted in a
greenhouse and held for four months. Diseased plants had significantly
(p=0.0001) reduced numbers of roots, shoot growth, number of internodes
and dry weight of the above ground parts. However, no significant
(p=0.1969) effect was found on overall root dry weight. Vascular
discoloration occurred in spurs of Pinot Noir and Chardonnay inoculated
with P. chlamydosporum, P. inflatipes and P. aleophilum
inoculated (107 conidia/ml)through pruning wounds. Invasion of spurs of
Pinot Noir and Chardonnay inoculated with P. chlamydosporum was
significantly more extensive than invasion by P. inflatipes and P.
aleophilum (p=0.0001).
PCR-RFLP marker differentiation of Ophiostoma piliferum from
other Ophiostoma sapstaining species. S. H. KIM (1), S.
Schroeder (2), and C. Breuil (3). (1) Chair of Forest Products
Biotechnology, Dept. of Wood Science, University of British Columbia, 2424
Main Mall, Vancouver, BC, V6T 1Z4, Canada; (2) Dept. of Geomicrobiology,
ICBM, Carl von Ossietzky University of Oldenburg, PO Box 2503, 26111
Oldenburg, Germany. Publication no. P-2000-0031-PCA.
To develop diagnostic markers for O. piliferum, a wood-stainer
causing important losses in the wood industry, we examined its
relationships to other Ophiostoma species using the nuclear
ribosomal RNA gene sequences. Phylograms based on the sequences of the
18S, 5.8S, and 26S rRNA and internal transcribed spacers 1 and 2 (ITS1 and
ITS2) suggested that O. piliferum could be separated from most of
the other sapstain Ophiostoma species. Then, we verified the
presence of polymorphisms in the 26S rRNA gene. For that we amplified a
part of the 26S rRNA gene (900 bp) by PCR from 77 strains of nine common
sapstaining Ophiostoma species and digested the PCR products with
29 restriction enzymes. Among the enzymes tested, only Hae III
generated a unique RFLP pattern for O. piliferum. This RFLP pattern
was identical among the fifty-two O. piliferum strains collected
from different geographic regions. We also observed intraspecific
variation in the beta-tubulin gene after digestion by Hinf I or Spe
I. USA O. piliferum strains were separated from the strains of
western Canada, New Zealand, and Europe, but not from the strains of
central Canada. Using PCR-RFLP markers, we were able to rapidly detect O.
piliferum on wood and the detection was feasible within 4 to 6 hours.
Cloning and characterization of a melanin biosynthetic THN reductase
gene from Ophiostoma floccosum. S. H. KIM (1), R. M. Eagen (1),
J. W. Kronstad (2), and C. Breuil (1). (1) Chair of Forest Products
Biotechnology, Dept. of Wood Science, University of British Columbia,
Vancouver, BC, V6T 1Z4, Canada; (2) Biotechnology Laboratory, Dept. of
Microbiology and Immunology, University of British Columbia, Vancouver,
BC, V6T 1Z4, Canada. Publication no. P-2000-0032-PCA.
Colonization of logs and lumber by O. floccosum causes a brown
to black discoloration. To understand the role of melanin in this
wood-staining fungus, we have cloned and characterized a reductase gene
involved in melanin biosynthesis. Using degenerated primers and PCR, a
reductase clone was isolated from an O. floccosum genomic library
and 1681 bp of its nucleotide sequence was determined. It contained 605 bp
of 5' untranslated sequence, a 883 bp open reading frame encoding 269
amino acids, and 193 bp 3' untranslated sequence. A 76 bp intron in the
reductase-encoding gene was detected. The O. floccosum reductase
shared 43-48% amino acid sequence identity with other fungal tri- or
tetra-hydroxynaphthalene (THN) reductases. To study the function of the
cloned O. floccosum reductase gene, we complemented THN reductase
deficient buf mutants of the rice blast fungus Magnaporthe
grisea. The complemented M. grisea buf mutant recovered a black
color like the wild type, indicating functional homology. The results
confirmed that O. floccosum uses the di-hydroxynaphthalene (DHN)
pathway for melanin production.
A new fusarium wilt of canola in Alberta, Canada in 1999. R. M.
LANGE (1), L. M. Harrison, and P. D. Kharbanda (1). Alberta Research
Council, P.O. Bag 4000, Vegreville, Alberta T9C 1T4; 2) Alberta
Agriculture, Food and Rural Development, Box 29, Beaverlodge, Alberta T0H
0C0. Publication no. P-2000-0033-PCA.
A wilt disease previously unreported in North America was observed in
the Peace River and north-east regions of Alberta in July to September,
1999. The disease induced chlorosis, stem necrosis, vascular discoloration
and premature desiccation in Brassica napus and B. rapa.
Disease incidence in some fields reached 29%. Fully- and partially-wilted
plants yielded 0.2 and 19.3% of asymptomatic plants, respectively. Fusarium
avenaceum and F. oxysporum were isolated from
surface-sterilised vascular tissue of affected plants. Severe wilt
symptoms were produced when stems of B. napus plants were
inoculated with F. avenaceum using root dip and stem inoculation
methods. When root-dip inoculation was used, F. avenaceum killed 75
to 90% of the inoculated plants while F. oxysporum killed 40% of
the plants. Brassica napus plants tested at the 1- to 7-leaf stages
were equally susceptible to F. avenaceum. In stem inoculation
tests, F. avenaceum caused severe wilting, while Fusarium
oxysporum produced only small lesions around the inoculation points.
PCR-based markers for the identification of Phoma sclerotiodes
infecting alfalfa. R. C. Larsen (1), G. J. Vandemark (1), F. A. Gray
(2), and M. GRITSENKO (3). (1) USDA, ARS, Prosser, WA 99350; (2)
University of Wyoming, Laramie, 82071; (3) Washington State University,
Prosser, WA 99350. Publication no. P-2000-0034-PCA.
Brown root rot of forage legumes is caused by the soilborne fungal
organism Phoma sclerotiodes and has caused severe mortality rates
in alfalfa crops grown in southwest Wyoming. Total nucleic acid
extractions were made from 19 different geographical isolates of the
organism. Oligonucleotide 10-mer RAPD primers have been identified from
PCR reactions that reveal polymorphisms specific to P. sclerotiodes.
The primers did not produce equivalent amplification products in other
soil-inhabiting pathogens including Aphanomyces euteiches, Fusarium
oxysporum, Verticillium albo-atrum, Phytophthora infestans, and Rhizoctonia
solani. A group of at least four of the isolates originating from
Boulder, WY resulted in unique polymorphisms not produced in the remaining
15 isolates when primers OpB 1, OpB 4, OpB 12 and OpC 12 were tested. This
preliminary evidence suggests that the 4 isolates are phylogenetically
distinct. The design of a SCAR marker specific for the detection of P.
sclerotiodes is in progress.
Effect of red clover vein mosaic carlavirus infection on seed
production and biomass yield in chickpea. R. C. LARSEN and P. N.
Miklas. USDA, ARS, Prosser, WA 99350. Publication no. P-2000-0035-PCA.
The effects of red clover vein mosaic virus (RCVMV) on biomass, seed
yield and quailty reduction in chickpea (Cicer arietinum L.) were
evaluated under field and greenhouse conditions. Test plants were
inoculated with the virus at pre-bloom (PE), bloom (B), and post-bloom
(PO) stages. Biomass was significantly (P=0.05) reduced in PE and B plants
but not in PO plants. Mean dry weights were 136.7 and 31.4 g for B and PE
treatments, respectively, compared to 289.2g in the healthy treatment.
Seed collected from infected plants resulted in yield losses of 61.5% and
49.9% for B and PO, respectively. Plants inoculated at the PE stage
resulted in losses of 100%. Seed quality as evaluated by seed size, was
markedly reduced in all infected treatments. Quality decreased
proportionally with earliness of infection. Only 2.3% of premium size 26
seed was obtained in the PO treatment compared to 9.8% in healthy. Seed
size 24 consisted of 18.9, 52.7, and 78.7% of the total yield from B, PO,
and healthy, respectively. The greatly reduced yields suggest that control
of the aphid vector (Acyrthosiphon pisum (Harris)) of RCVMV is
critical at pre-bloom stages of crop growth in virus-affected areas.
The green fluorescent protein (GFP) to monitor Cartapip and staining
fungi in wood. S. W. LEE, S. H. Kim, and C. Breuil. Chair of Forest
Products Biotechnology, Dept. of Wood Science, University of British
Columbia, Vancouver, BC, V6T 1Z4, Canada. Publication no. P-2000-0036-PCA.
We tested the feasibility of using the GFP as a biomonitoring tool for
a wood protecting biocontrol agent, Cartapip (Ophiostoma piliferum)
and for a sapstaining fungus O. piceae.The two fungal species were
transformed with gGFP plasmid. The GFP gene was integrated into the
chromosomes of the two fungi and stably maintained. The GFP gene insertion
had no effect on fungal growth and pigmentation. We observed under the
fluorescence microscope the GFP expression in different types of cells,
including yeast-like spores, synnemata, and mycelium. The GFP
transformants were easily distinguished from the wild-type strains and the
other fungal species both on culture media and on wood. Green fluorescence
in fungal cells could be detected up to 4 months after infection on wood.
Our results demonstrated that the GFP marker is easily detectable and can
be used to map the spatial distribution of fungi in the environment.
Detection of gene expression in an open reading frame of SAY
infected periwinkle plants using RT-PCR and Northern Blot analysis.
L. Maes, H. Flores, and M. Shaw. New Mexico Highlands University,
Las Vegas NM 87701. Publication no. P-2000-0037-PCA.
The Severe strain of Western Aster Yellows (SAY) phytoplama has been
well categorized with resepect to taxonomic and nomenclature analysis.
However little of its mechanistic approaches to replication and gene
expression have been explored. A segment of Severe strain of Western Aster
Yellows (SAY) phytoplasma DNA, approximately 3 kb pairs long, was
partially sequenced. The sequence was then used to locate new open reading
frames (ORF) and furthermore detect gene expression at time-specific
intervals during plant development. Whole SAY infected plant RNA was used
for RT-PCR analysis along with primers specific to the new ORF. This
analysis confirmed gene expression in various 1 month old systematic SAY
infected periwinkle plants and was furthermore complimented by Northern
Blot analysis using gene specific probes against total SAY infected RNA
for the specific plant and time interval.
Assessment of Swiss needle cast disease development. II. Temporal
and spatial investigations of fungal colonization and symptom development.
D. K. Manter (1), L. A. Winton (2), G. M. Filip (1), and J. K. Stone
(2). (1) Forest Science Department, (2) Department of Botany and Plant
Pathology, Oregon State University, Corvallis OR 97331. Publication no.
P-2000-0038-PCA.
Swiss needle cast (SNC) is a foliar disease of Douglas-fir caused by
the fungus Phaeocryptopus gaeumannii. SNC occurs throughout the
range of Douglas-fir and its increasing severity has become the cause of
concern throughout coastal Oregon and Washington. Symptoms of disease in P.
gaeumannii infected trees were well correlated with fungal
colonization. Furthermore, fungicide applications that reduced P.
gaeumannii infection resulted in decreased needle abscission and
chlorosis. Variation in fungal colonization was also detected within sites
and tree canopies. Trees on south slopes from our coastal sites had higher
fungal colonization and more severe symptoms compared to north slopes.
However, for interior sites, north slopes had higher fungal colonization
and symptoms. Within individual trees, fungal colonization was
consistently higher both in the upper portions of the canopy and the south
facing foliage. Spatial patterns of P. gaeumannii development vary
both at the macro and micro-scales and are consistent with observed
patterns of symptom development. The strong correlation between fungal
colonization and symptom development supports our model in which the major
impact of SNC on host physiology is through stomatal occlusion and reduced
gas exchange.
Comparative effect of Actigard and Ridomil Gold on development of
Phytophthora crown and root rot on chile pepper plants. M. E. MATHERON
and M. Porchas. Yuma Agricultural Center, University of Arizona, Yuma, AZ
85364. Publication no. P-2000-0039-PCA.
The activity of foliar applications of Actigard (acibenzolar-S-methyl)
was compared to a soil drench application of Ridomil Gold (mefenozem) with
respect to plant survival and growth of chile pepper plants in field soil
naturally infested with Phytophthora capsici. Two-month-old Anaheim
TMR 23 chile pepper plants received either three treatments of Actigard at
a rate of 75 mg a.i./liter of water or one treatment with Ridomil Gold at
a rate of 100 mg a.i./liter. Plants were either watered as needed (every
2-3 days) or subjected to a 48 hr flooding period every 2 weeks for a
period of 2 months. For nonflooded and flooded soil, survival and shoot
growth were significantly higher for plants receiving Actigard compared to
nontreated pepper plants; however, corresponding values for plants
receiving Ridomil Gold were significantly higher than those treated with
Actigard. In flooded soil, root growth for plants treated with Ridomil
Gold was significantly greater than that for plants treated with Actigard;
however, when plants were watered as needed, no significant difference
among chemical treatments was recorded.
Genetic diversity in the phloroglucinol biosynthetic locus of Pseudomonas
fluorescens from different geographic locations. O. V.
MAVRODI (1), D. V. Mavrodi (1), B. McSpadden Gardener (2), D. M. Weller
(2), L. S. Thomashow (2). (1) Dept. of Plant Pathology, Washington State
Univ., Pullman; (2) USDA-ARS, Pullman, WA 99164-6430. Publication no.
P-2000-0040-PCA.
The reduction in take-all disease, caused by Gaemannomyces graminis
var. tritici, that occurs during extended monoculture of wheat is
called take-all decline (TAD). 2,4-Diacetylphloroglucinol (DAPG)-producing
fluorescent Pseudomonas spp. that play a major role in TAD were
isolated from soils of different geographical locations and cropping
histories. Diversity within phlD, a key gene in the biosynthesis of
DAPG, was studied by RFLP analyses. RFLP profiles within phlD largely
correlated with clusters obtained by RAPD analysis, and were conserved
among strains from the same site and cropping history. A set of strains
representative of 30 phlD RFLP groups did not differ in the amounts
of PHL produced in vitro. These strains were characterized for the
presence of pyrrolnitrin and pyoluteorin biosynthetic genes by PCR and DNA
hybridization. We conclude that phlD is useful as marker to study
the genetic diversity and population structure of DAPG-producing Pseudomonas
spp. in soil.
Determination of chitinase activity associated with mycoparasitism
in Trichoderma atroviride from Alaska. J. H. MCBEATH and P. A.
Gay. Plant Pathology and Biotechnology Lab, University of Alaska
Fairbanks, Fairbanks, AK 99775. Publication no. P-2000-0041-PCA.
Trichoderma atroviride, a versatile, aggressive biological
control organism found in Alaska, has strong activity against a broad
spectrum of plant pathogens, e.g. Botrytis cinerea, Coprinus
psychromobidus, Fusarium solani, Microdochia nivale, Myriosclerotinia
borealis, Phytophthora infestans, Pythium spp., Sclerotinia
sclerotiorum, Typhula spp., Verticillium dahlia, etc.
Unlike many commercial biocontrol products that require elevated
temperature to be active, Alaskan T. atroviride, with a temperature
range of <4°C to 33°C, maintain strong activities at low
temperatures. Several mechanisms are involved in the mycoparasitism and
endochitinases are found to be a major component. Chitinase activities
were determined spectrophotometrically and in plate assays through the
quantitative degradation of glycol chitin both in the presence and absence
of plant pathogens. Further investigations are being conducted to
determine which chitinase isozymes are expressed differentially in T.
atroviride in the presence of plant pathogens.
Bacterial populations associated with take-all disease on wheat.
B. B. MCSPADDEN GARDENER and D. M. Weller. USDA-ARS Root Disease and
Biological Control Research Unit, Washington State University, Pullman, WA
99164-6430. Publication no. P-2000-0042-PCA.
The composition of rhizosphere bacterial communities changed following
infection of wheat roots by Gaeumannomyces graminis var. tritici.
The abundance of Pseudomonas spp. was greater on diseased roots,
based on culturing with selective media and T-RFLP analyses of root
washes. Genomic fingerprinting of the most abundant culturable populations
indicated an increase in the dominance of certain genotypes. Some of these
bacteria were observed to be inhibitory to the take-all fungus in vitro.
Other in vitro assays indicated that some of the dominant culturable
populations also can interact with DAPG-producing biocontrol bacteria. The
occurrence of these various bacterial populations in two different WA
soils will be discussed.
Infection of Fiju apple by core rot fungi and disease control in
California. T. J. Michailides, D. P. Morgan, and D. Felts. Publication
no. P-2000-0043-PCA.
Core rot of apple has been recorded in Australia, Canada, Netherlands,
New Zealand, South Africa, United Kingdom, and the United States. During
late summer to early fall of 1993 through 1999 core rot was widespread
throughout the apple-growing areas in California. The following fungal
pathogens were isolated from core rotted apple samples: Coniothyrium
sporulosum (77 to 100%), species of Alternaria (2.4 to 7.9%), Fusarium
(1.6 to 2.4%), and Curvularia and non-filamentous yeasts (< 1%).
Koch's postulates using C. sporulosum reproduced core rot symptoms
in inoculated apples. Serial inoculations, starting at bloom and ending at
harvest showed that fruit is most susceptible to infection by C.
sporulosum during bloom time but infections continue to occur
throughout the season. Propagules of C. sporulosum, up to 34,000
per flower spur, were recorded during full bloom in two commercial Fuji
orchards. In only one year, Ziram 76 DF reduced core rot, while in two
subsequent fungicide trials, none of the fungicides registered for apples
in California reduced core rot.
Novel fungicidal metabolite from known plant pathogen useful for
control of plant disease. T. C. MILLER (1), L. P. Sharp (1), R. W.
Emerson (1), D. A. Peterson (1), R. H. Hughes (1), D. G. Crosby (2), and
W. D. Gubler (2). (1) SummusGroup, LTD, Woodland, CA. (2) University of
California, Davis, CA. Publication no. P-2000-0044-PCA.
The fungicidal efficacy of a secondary metabolite of a known plant
pathogen is described. In natural form, either as an extract or
synthesized, the characterized molecule shows broad fungicidal activity
across several classes of fungi, particularly toward numerous plant and
human pathogens among the higher fungi (deutero-, asco-, and
basidiomycetes). Similarly, numerous natural co-metabolites and synthetic
chemical analogs also show varying ranges of activity. Dose-response data
for numerous target pathogens will be discussed vis a vis the
combinatorial chemistry surrounding the toxiphore, a structure without
known similarity in pesticidal chemistry. This suggests similar active
molecules might be found in similar (niche/taxonomic) plant pathogens.
Toxicological data will be discussed, along with greenhouse and field
efficacy. Preliminary data suggests a novel, safe, effective, natural
class of fungicidal chemistry.
Bacterial leaf streak of intermediate wheatgrass. S. K. MOHAN
and V. P. Bijman. Research and Extension Center, University of Idaho,
Parma, ID 83660. Publication no. P-2000-0045-PCA.
During July 1996, a field of intermediate wheatgrass (Elytrigia
intermedia 'Rush') grown for seed in Washington County, Idaho was
found affected by a disease with symptoms of leaf streaks and blighting.
Lesions on the leaves appeared as water-soaked, translucent, long, narrow
streaks that turned brown, necrotic, and often coalesced into blighted
areas. Frequently, a honey-colored, dried, granular or flaky exudate was
present on the lesion surfaces. A bacterium forming light yellow colonies
on nutrient agar was consistently isolated from symptomatic tissues. Based
on cultural characteristics, results from bacteriological tests, Biolog GN
MicroPlates, fatty acid profiles, and pathogenicity to intermediate
wheatgrass, wheat, barley, rye, oats and several grass species belonging
to the genera Agropyron, Bromus, Dactylis, Elytrigia
and Leymus, the bacterium was identified as Xanthomonas
translucens pv. cerealis. An assay of the seedlot used for
field planting showed a contamination level of 7.48 × 10(^4) cfu/g of
seed, and greenhouse grow-out tests produced infected seedlings. This is
the first report of natural occurrence of this pathogen on this grass
species.
Selection of root endophytic fungi to suppress Verticillium
wilt in eggplant. K. NARISAWA (1,2), H. Kawamata (1), and T. Hashiba
(3). (1) Plant Biotechnology Institute, Iwama, Nishi-Ibaraki, Japan. (2)
Department of Biological Sciences, University of Alberta, Edmonton, AB,
T6G 2E9. (3) Department of Environmental Biotechnology, Tohoku University,
Sendai. Japan. Publication no. P-2000-0046-PCA.
Verticillium wilt of eggplant, caused by the soilborne fungus, Verticillium
dahliae, is one of the most serious plant diseases in the world.
Biocontrol agents for the disease have not been developed or, if
developed, have not been accepted widely by growers. A more effective
control agent for the disease might be found among species that grow
endophytically within the root tissues. We isolated fungi from eggplant,
melon, tomato, strawberry, and Chinese cabbage roots and tested the
isolates for their ability to suppress Verticillium wilt of
eggplant. Ninety-nine isolates were recovered and eleven of these isolates
almost completely suppressed the disease. Most of these were originally
isolated from eggplant and included Fusarium, Heteroconium,
Phialocephara, and Trichoderma species. Hyphae of three
effective isolates (H. chaetospira, P. fortinii and Hyaline-septate
fungus) extensively colonized the inner part of cortical tissues of the
root axis without causing external symptoms.
First report of vesicular-arbuscular mycorrhizal fungi on Brassica and
its effect on the downy mildew disease. R. Nelson and P. N. Achar.
Department of Microbiology, University of Durban-Westville, Private Bag x
54001, Durban- 4000, South Africa. rnelson@pixie.udw.ac.za &
pachar@pixie.udw.ac.za. Publication no. P-2000-0047-PCA.
The mutual association between three different species of
vesicular-arbuscular mycorrhizal (VAM) fungi viz., Glomus aggregatum,
G. fasciculatum and G. mosseae were first screened for
symbiotic response with Brassica oleracea var. capitata
(cabbage) cv. Hercules. The interaction of VAM and the downy mildew
pathogen (Peronospora parasitica) and their effect on cabbage
seedlings was also investigated under controlled environmental conditions.
The establishment of VAM was confirmed using light and scanning electron
microscopy. This is the first report on the VAM infection in cabbage.
Seedlings inoculated with VAM fungi had a lower disease incidence than the
non-mycorrhizal ones. Mycorrhizal seedlings inoculated with P.
parasitica showed higher root and shoot dry weights than the
non-mycorrhizal infected plants. However, the values were lower than the
uninfected mycorrhizal seedlings. Significant difference in the contents
of free amino acids (especially Arginine, Lysine, Phenylalanine, Proline
and Serine) were found in mycorrhizal plants that were infected with P.
parasitica. There were also significant changes in the soluble
protein, phenol and other compounds between the various treatments. The
mechanism by which VAM fungi can reduce downy mildew disease incidence in
cabbage and contribute to the resistance of the host is discussed.
Influence of sub- vs. top-irrigation and surfactants in a
recirculating cultural system on disease incidence caused by Phytophthora
and Pythium in potted plants. C. J. NIELSEN (1), M. E.
Stanghellini (1), D. H. Kim (1), S. L. Rasmussen (2), and P. A. Rorbaugh
(2). (1) Department of Plant Pathology, University of California,
Riverside, 92521; (2) Department of Plant Pathology, University of
Arizona, Tucson, 85721. Publication no. P-2000-0048-PCA.
Zoospores of Phytophthora capsici and Pythium aphanidermatum
were shown to spread, respectively, from inoculated source plants to
healthy potted pepper and poinsettia plants located on separate
ebb-and-flow benches solely via the recycled nutrient solution, which
originated from a common reservoir. Amending the recirculating nutrient
solution with a surfactant, which selectively kills zoospores, resulted in
100% control of the spread of these root pathogens from inoculated source
plants in both ebb-and-flow and top-irrigated cultivation systems. In the
absence of a surfactant in the recirculating nutrient solution, all plants
in an ebb-and-flow sub-irrigation system died within 6 to 7 weeks. In
contrast, all plants in a top-irrigated system died within 2 weeks. These
latter results indicate that the use of recycled irrigation water in an
ebb-and-flow cultural system is less conducive to pathogen spread than in
a top-irrigated (i.e., drip) cultural system.
Potato late blight in Idaho from 1995-1999. P. NOLTE (1), R.
Forster (2), S. Mohan (3), and N. Olsen (4). PSES Department, University
of Idaho (1) 1776 Science Center Dr, Idaho Falls, ID 83402; (2) 3793 N
3600 E, Kimberly, ID 83341; (3) 29603 U of I Lane, Parma, ID 83660; (4)
Box 1827, Twin Falls, ID 83030. Publication no. P-2000-0049-PCA.
New isolates of the late blight fungus (Phytophthora infestans)
were found in southwest Idaho in 1995 in Canyon and Owyhee counties. Minor
infestations also occurred in south central Idaho in Cassia, Minidoka and
Jerome counties. Hot, dry conditions throughout the state in 1996 kept
infestations to a minimum with only minor crop damage in the south central
region reported. Wet conditions in 1997 were conducive for widespread late
blight in the south central region and movement into the previously
uninfested south eastern counties of Bingham, Bonneville, Power, Madison
and Jefferson. Both 1998 and 1999 were hot and dry but minor infestations
in the south central and south eastern production regions followed by
significant rainfall in late August of 1998 led to widespread tuber blight
during the storage season. Isolates in 1995 and 1996 were all US-8 while
in 1997 US-6, US-7, US-8 and US-11 were detected. In 1998 US-8 and US-11
were found and in 1999 only US-8 was detected. Both mating types have been
present but no new isolates have been reported.
Assessment of sweet cherry powdery mildew [Podosphaera
clandestina (Wallr.:Fr.) Lev.] severity using digital image analysis.
J. W. OLMSTEAD (1), G. G. Grove (2), and G. A. Lang (1). (1) Irrigated
Agriculture Research and Extension Center, Washington State University,
Prosser, WA 99350; (2) Tree Fruit Research and Extension Center,
Washington State University, Wenatchee, WA 98801. Publication no.
P-2000-0050-PCA.
A personal computer-based method for quantifying powdery mildew (PM) [Podosphaera
clandestina (Wallr.:Fr.) Lev.] colonization of sweet cherry leaf disks
was evaluated for increased accuracy and precision compared to visual
assessment. Leaf disks from 14 cultivars were rated for PM severity
(percentage of colonized leaf area) by: 1) visual assessment; 2) image
analysis; and 3) image analysis after painting PM colonies. The latter
technique, where PM colonies were identified using a dissecting microscope
and subsequently covered with white paint, provided a standard for
comparison of the other assessment methods. A low correlation (r(^2)
= 0.66 and 0.46, P < 0.01) was detected between image analysis
and painted PM area in two experiments, whereas visual assessment was
highly correlated with painted PM area (r(^2) = 0.88 and 0.95 P
< 0.01). Rank orders of the 14 cultivars differed significantly (P
< 0.05) when image analysis was compared to painted PM area; however,
visual assessment was not significantly different (P > 0.05)
than painted PM area. Image analysis of PM area on sweet cherry leaf disks
offered no significant improvement over visual assessment methods
currently used, presumably due to the inability of the software to detect
slight differences in color between PM and leaf tissue.
Effect of powdery mildew on pecan nut quality. M. W. OLSEN, S.
Rasmussen, and C. Nischwitz. Department of Plant Pathology, The University
of Arizona, Tucson, AZ 85721. Publication no. P-2000-0051-PCA.
In 1998 and 1999, heavy outbreaks of the conidial stage of pecan
powdery mildew (Microsphaera sp.) occurred in a large orchard in southern
Arizona. Disease appeared in early summer on the green shucks causing
superficial lesions with dense sporulation. No other parts of the plant
were affected. The fungus continued to sporulate sporadically until shucks
began to dry in the fall. In order to determine if the infections were
affecting pecan nut quality, ten pairs of symptomless clusters on each of
ten trees in two different varieties were selected, and one of each pair
treated with fungicide and the other left untreated. Biweekly applications
of azoxystrobin, rotated with one treatment of myclobutanil, from June 28
through September 10, 1999, controlled mildew completely. At harvest, nut
weight, development and color were determined using USDA Standards. Within
variety, there were no differences (t-Test: paired two samples for means)
in weight (all nuts) or color ranking (all developed nuts) between
non-treated infected clusters and treated symptomless clusters in pairs.
Results indicate that although shucks may have a high percentage of area
infected by mildew, the infections do not affect nut quality, and
fungicide treatments are not warranted.
Worldwide population structure of Alternaria sp. causing
brown spot of tangerines and tangerine hybrids. T. L. PEEVER (1), A.
Ibanez (2) and L. W. Timmer (2). (1) Department of Plant Pathology,
Washington State University, Pullman, WA, USA; (2) University of Florida,
CREC, Lake Alfred, FL, USA. Publication no. P-2000-0052-PCA.
Sixty-seven isolates of Alternaria sp. causing citrus brown spot
were sampled from tangerine (Citrus reticulata) and tangerine ×
grapefruit (C. reticulata × C. paradisi) hybrids in six
countries. Isolates were scored for variation at 16 putative RAPD loci and
the population structure of the pathogen determined. Quantitative
estimates of pathogenicity (disease incidence) were obtained for all
isolates by spray-inoculating detached leaves. Analysis of RAPD allele
frequencies revealed highly significant differentiation between samples of
isolates from USA (Florida) and Colombia and samples from Turkey, South
Africa, Israel and Australia. Private alleles (sensu Slatkin) were
observed at 11 of 16 loci among all 6 countries. Analysis of RAPD
phenotypes of individual isolates revealed at least 6 genetically distinct
groups of isolates which did not necessarily correspond to country of
origin. Large differences in pathogenicity were detected among isolates
and those from the USA were significantly more pathogenic than isolates
from other countries. These results indicate that the brown spot pathogen
consists of several genetically and pathogenically distinct,
non-recombining asexual lineages worldwide. The significance of this
variation to brown spot breeding programs and pathogen evolution will be
discussed.
Development of Phytophthora infestans in potato tubers of
nine clones in storage. L. D. PORTER, D. A. Johnson, and T. F.
Cummings. Department of Plant Pathology, Washington State University.
Publication no. P-2000-0053-PCA.
Potato tubers of Russet Burbank, Russet Legend, Russet Norkotah,
Bannock Russet, Gem Russet, Ranger Russet, Umatilla Russet, A84118-3, and
A90586-11 were inoculated with an US-8 isolate of Phytophthora
infestans by placing 0.05 ml of inoculum with 1 to 500 sporangia on a
single tuber eye. Incidence and severity of rot was determined after 5-26
weeks in storage at 4, 7, and 9 C. Time until initial sporulation on
infected tubers incubated at 10, 18, and 25 C was determined. Severity of
internal rot was significantly less (P<0.05) for Umatilla
Russet, Russet Legend, and A90586-11 than for the other clones. Ranger
Russet and Bannock Russet were the most susceptible clones. Incidence of
infection for Umatilla Russet did not differ from susceptible clones, but
severity of rot was significantly less. Rot severity depended on
temperature, inoculum concentration and time in storage. Rot at 4 and 7°C
was significantly less than at 9°C. Infection in all infected tubers was
evident within 5 weeks of storage at 9°C. Initial sporulation for all
clones after removal from storage occurred within 17-19 hours at 25 and 18°C.
Sclerotinia stem infection in flax in Manitoba and Saskatchewan.
K. Y. Rashid. Cereal Research Centre, Agriculture and Agri-Food Canada,
Morden, MB R6M 1Y5, Canada. Publication no. P-2000-0054-PCA.
Flax (Linum usitatissimum L) is a major field crop in western
Canada, grown on 1-1.5 million hectares annually. Sclerotinia
sclerotiorum (Lib.) De Bary is a common plant pathogen affecting many
crops in western Canada including canola, field peas, beans, lentils, and
sunflower. This pathogen has not been reported affecting flax from the
eastern Canadian Prairies prior to 1999. Early symptoms are small
water-soaked lesions on the stem with light grey color. The lesions
develop to cover most of the stem which become bleached-white in color.
Advanced infections cause shredding, disintegration of the fibre, and stem
breakage. Sclerotia formed inside the infected part of stems are
cylindrical in shape with 1-2 mm in diameter and 5-30 mm in length.
Disease survey of the flax growing areas in 1999 revealed the presence of S.
sclerotiorum infections in 20% of the fields surveyed in Manitoba and
10% of fields surveyed in Saskatchewan. Disease incidence ranged from 1 to
30% infected plants, and severity ranged from 5-60% stem area affected.
The disease was observed only in heavily lodged flax with no sign of
infection in normal standing flax next to the lodged plants in the same
field or adjacent fields. These observations suggest that lodging exposes
the flax to sclerotinia infection by direct stem contact with infested
soil. The recommendations for minimizing the disease damage are to use
flax cultivars with good lodging resistance, avoid fields with high
sclerotinia inoculum from previously infected crops, and avoid excessive
soil moisture conditions.
Characterization of a Rhizoctonia-like fungus causing
web-blight of Douglas-fir and true fir Christmas trees. P. W. Reeser,
M. L. PUTNAM, L. M. Winton, and M. Nesson. Dept. of Botany and Plant
Pathology, Oregon State Univ., Corvallis, OR 97331. Publication no.
P-2000-0055-PCA.
A foliar web-blight of Douglas-fir and true fir caused by a bi-nucleate
Rhizoctonia-like fungus has been observed in some Christmas tree
plantations in Oregon since 1996. The disease can kill large areas of
peripheral foliage rendering trees unmarketable. Symptoms may develop
after trees have been graded and sold, but before harvest and shipment.
Two isolates of the fungus were studied to determine taxonomic status. The
isolates did not anastomose when paired with tester strains for AG-A,
AG-B, AG-Ba, AG-E, AG-F, AG-G, AG-K or AG-R. Sequence analysis of ITS
regions 1 and 2 of nuclear ribosomal DNA placed the isolates between Ceratobasidium
cornigerum and Ceratobasidium oryzae-sativae. Transmission
electron microscopy of the septal pore apparatus revealed a dolipore
septum and parenthesomes with few, large perforations. While anastomosis
group analysis was inconclusive, the bi-nucleate condition, septal pore
ultrastructure and DNA sequence analysis suggest that the Douglas-fir and
true fir web-blight fungus belongs in the genus Ceratobasidium.
Characterisation of a cloned fragment of the severe strain of aster
yellows (SAY) Phytoplasma plasmid DNA. J. RIR-SIMA-AH (1), D. Crombie
(1), and M. E. Shaw (1). (1) Department of life Sciences, New Mexico
Highlands University, Las Vegas, NM 87701. Publication no.
P-2000-0056-PCA.
Extrachromosomal DNA molecules(plasmids)encoded traits are important in
determining pathogenicity and virulence in several plant pathogenic
bacteria. Plasmids have also been found associated with many Phytoplasmas,
but their role remains unclear. Plant pathogenic Phytoplasma plasmid DNA
may posses genes with the potential to affect Phytoplasma pathogenicity. A
cloned fragment of plasmid DNA from the severe strain of aster
yellows(SAY) has been partially sequenced. Using primers designed from the
partial sequence, Polymerase chain reaction gave PCR products of the
expected size from isolates of SAY infected periwinkle plants, but not
healthy plants. BLAST search was done for sequence comparisons. To
determine whether Putative Open Reading Frames(ORFs) are transcribed in
infected plants, primers were designed for RT-PCR with total RNA from
infected and healthy plants. While the plasmid is being completely
sequence, no function has yet been ascribed to the partially sequenced
fragment.
Virus-infected native lupine detected in Hatcher Pass, Alaska.
N. L. ROBERTSON and D. F. Knight-Slater. USDA/ARS, Arctic Plant Germplasm
Repository, Palmer, AK. Publication no. P-2000-0057-PCA.
Studies on plant viruses infecting native plants in Alaska are scarce.
We detected diseased Lupinus nootkatensis plants in their natural
habitat in the Hatcher Pass region north of Anchorage, Alaska. Leaf
symptoms consisted of prominent vein-clearing and some stunting. Partially
purified particles were isolated from diseased leaves and not from healthy
plants. Virions appeared to be about 25 nm isometric particles when
stained with uranyl acetate and viewed with the electron microscope.
Ultrathin sections of diseased leaves contained similar virus particles
and inclusion bodies in the cytoplasm. Protein extracts from purified
virions produced a 41-42kDa protein presumed to be the coat protein.
Virion RNA was determined to be about 4.3Kb without a poly(A)-tail; a
corresponding synthesized cDNA fragment was sequenced. Based on the given
parameters of the shape and size of the virions, the size of the coat
protein and RNA genome, and a partial nucleotide sequence, we conclude
that the virus belongs to the plant virus family Tombusviridae.
The use of hot water treatments to effectively control Phaeoacremonium
vine decline of grapevines. S. N. Rooney (1) and W. D. Gubler (1). (1)
Department of Plant Pathology, University of California, Davis 95616.
Publication no. P-2000-0058-PCA.
Decline of young grapevines caused by Phaeoacremonium spp. has
become a serious disease in some California vineyards. Effective control
of this disease has been elusive. One control program often used to
eradicate pests in grapevines is the use of hot water treatments. The
immersion of inoculated cuttings for thirty minutes in a 51°C water bath,
was tested for effectiveness in eliminating Phaeoacremonium spp.
Dormant grapevine cuttings were inoculated with a spore suspension of P.
chlamydosporum or P. inflatipes by vacuum infiltration.
Following inoculation and treatment in hot water, cuttings were incubated
two to four weeks then evaluated for vine decline symptoms. Results
obtained from symptom evaluations and isolations of the cuttings indicate
that a hot water treatment of 51°C for thirty minutes is ineffective in
eliminating Phaeoacremonium spp. Cuttings inoculated and treated
with hot water showed similar vascular streaking to those inoculated
non-treated cuttings. In addition, Phaeoacremonium spp. were
differentially recovered from the hot water treated cuttings depending on
grapevine variety.
Occurrence and distribution of Bipolaris sorokiniana in
eastern Washington. K. L. SCHROEDER and D. M. Weller. USDA-ARS,
Washington State University, Pullman, WA 99164. Publication no.
P-2000-0059-PCA.
Common root rot of wheat was previously reported to be of little
importance in Washington State. A survey of eastern Washington winter
wheat fields was conducted in the fall of 1999 to document the occurrence
of fungal root pathogens. During the survey, 10 to 15 wheat plants were
removed from each of 81 different fields throughout eastern Washington.
The wheat roots were washed and placed into a cone-tainer with
vermiculite. The pathogens were baited by planting barley into the
cone-tainers and allowing the roots to grow into the washed wheat roots.
Of the samples collected, 85% were found to have symptoms indicative of
Rhizoctonia root rot or common root rot. Upon isolation from the diseased
root segments, Bipolaris sorokiniana was recovered from 62% (43
locations) of the infected plants. One isolate was recovered from
symptomless plant tissue.
Comparison of copper octanoate and copper hydroxide for controlling
cucumber powdery mildew. F. S. Sedun and C. D. Wilson. Publication no.
P-2000-0060-PCA.
Cucumber powdery mildew Sphaerotheca fuliginea is a common
disease of cucurbits. Copper octanoate (CuC8) is a new fungicide that is
effective against this and other diseases. CuC8 is a salt of the naturally
occurring fatty acid, octanoic acid. Cucumber plants (variety Revenue)
were grown in a soil-less mix under greenhouse conditions. One and eight
days after emergence, plants were sprayed with copper octanoate at
concentrations of 90 and 180 ppm Cu(^2). Copper hydroxide (CuOH)
treatments (90, 180 and 1000 ppm (Cu(^2)) were included as standards.
Twelve days after the first spray the cotyledons of the CuC8 treatments
(90 and 180 ppm) had mildew coverage of 24 and 0%, respectively. The CuOH
treatments (90, 180 and 1000 ppm) had mildew coverage of 80, 67 and 56%,
respectively. Untreated plants had a mildew coverage of 99.6%. These
results have been confirmed by extensive greenhouse and field tests. We do
not know why CuC8 is more effective than CuOH against powdery mildews.
Use of antagonistic bacteria to control blister spot of apple in
British Columbia. P. L. SHOLBERG (1) and K. E. Bedford (2).
Agriculture & Agri-food Canada, Pacific Agri-Food Research Centre,
Summerland, BC V0H 1Z0. Publication no. P-2000-0061-PCA.
Blister spot, a bacterial disease of apples caused by Pseudomonas
syringae pv. papulans is a serious problem on Mutsu. Trials in
1997 in British Columbia on four popular cultivars showed that Jonagold
and Fuji were also susceptible to blister spot. The potential of two
bacterial antagonists, Pseudomonas sp. isolate 1100-6, and Bacillus
sp. isolate EN-63, for the control of blister spot was established in a
preliminary 1997 trial. Disease incidence and severity were reduced on
Mutsu, Fuji, and Jonagold cultivars. In 1999 a more substantial field
trial was established. One spray application of 1100-6, was highly
effective in reducing disease incidence and severity of blister spot on
Mutsu apples when applied once during the infection period (two to four
weeks after bloom), and challenged with the blister spot pathogen two
days, and three weeks later. The commercial product, BlightBan, a dry
formulation of Pseudomonas fluorescens isolate A506, EN-63, as well
as 1100-6 were also tested on Jonagold apple with inconclusive results.
Genetics of resistance to the chlorosis component of tan spot of
wheat. P. K. SINGH and G. R. Hughes. Department of Plant Sciences,
University of Saskatchewan, 51 Campus Drive, Saskatoon, SK S7N 5A8.
Publication no. P-2000-0062-PCA.
Tan spot, caused by the fungus Pyrenophora tritici-repentis, is
an important foliar disease of wheat throughout the world and particularly
in western Canada. Two phenotypically distinct symptoms are associated
with this disease, tan necrosis and extensive chlorosis. This study
investigated the genetic control of the chlorotic component in five
resistant wheat cultivars. Resistant cultivars Red Chief, Hadden, Erik,
Glenlea and 86ISWN 2137 were crossed with the susceptible cultivar 6B-365.
A partial diallel series of crosses among the resistant cultivars was also
made to determine allelism of the resistance genes. For both sets of
crosses, F(1) and F(2) plants and F(2:3) families were tested at the
two-leaf stage with isolate Ptr 94-8-2 [race 3] which induces extensive
chlorosis. Disease assessment was based on the presence or absence of
extensive chlorosis. Absence of chlorosis [resistance] was dominant and
the segregation pattern in the F(2) and F(3) generations indicated that a
single gene controlled resistance. Absence of segregation in the 10
crosses among the resistant cultivars indicated that they share the same
gene for resistance.
Genetics of resistance to the necrosis component of tan spot of
wheat. P. K. Singh and G. R. Hughes. Department of Plant Sciences,
University of Saskatchewan, 51 Campus Drive, Saskatoon, SK S7N 5A8.
Publication no. P-2000-0063-PCA.
Tan spot, a foliar disease of wheat (Triticum aestivum), is
caused by the fungus Pyrenophora tritici-repentis. In recent years,
it has been a major component of the leaf spot disease complex of wheat in
western Canada. Since knowledge of the genetic control of resistance
assists efforts to develop resistant cultivars, this study was conducted
to determine the inheritance of resistance to the necrosis component of
tan spot in four resistant cultivars, spring wheat cultivars Erik and
86ISWN 2137, and winter wheat cultivars Hadden and Red Chief. The
resistant cultivars were crossed to two susceptible spring wheat cultivars
Glenlea and Kenyon. Plants of the F(1) and F(2) generations, and F(2:3)
and F(3:4) families of each cross were tested at the two-leaf stage with
isolate Ptr 92-164 (race 2) which induces tan necrosis. Lesion type was
used to rate plants as either resistant or susceptible. Resistance was
recessive and due to a single gene in all crosses. Lack of segregation in
the F(2) generation and in F(2:3) families produced from all possible
crosses among the resistant cultivars indicated that Red Chief, Hadden,
Erik and 86ISWN 2137 possess one resistance gene in common.
Serenade, a new biocontrol agent for powdery mildew control on hops.
W. R. SLABAUGH (1) and Mitch Rohlfs (2). (1) AgraQuest, Inc., 1050 Echo
Avenue, Parma, ID 83660; (2) Rohlfs Agricultural Research, 6203 Terrace
Heights Drive, Yakima, WA 98901. Publication no. P-2000-0064-PCA.
Powdery mildew, caused by Sphaerotheca macularis, has
become a serious disease on hops (Humulus lupulus) grown in the
Pacific Northwest. Total crop failure can be experienced on susceptible
varieties in the form of unmarketable cones. During the 1999-growing
season, Serenade (Bacillus subtilis, strain QRD713) was compared
with myclobutanil for efficacy of powdery mildew control in a hop yard on
the cultivar Chelan near Sunnyside, Washington. Disease pressure was
moderate in the upper canopy and high in the lower canopy. Serenade was as
effective as myclobutanil. Serenade WP at 8 lbs/acre and myclobutanil at
0.6-oz active ingredient/acre provided 94 and 100 percent control,
respectively, based on leaf area in the upper canopy. In summary, Serenade
appears as effective as conventional fungicides but has the additional
benefits of being a fungicide resistance management tool, having low
environmental impact, fitting into Integrated Pest Management programs and
having a short re-entry period. Additional studies are in progress to
confirm these results.
Control of brown rot of sweet cherry fruit with a preharvest
fungicide, a postharvest yeast, and modified atmosphere packaging. R.
A. SPOTTS, L. A. Cervantes, and T. J. Facteau. Mid-Columbia Agricultural
Research and Extension Center, Oregon State University, Hood River 97031.
Publication no. P-2000-0065-PCA.
Sweet cherry trees cv. Lapins and Lambert were sprayed with
propiconazole (Orbit 3.6E) at 0.28 kg/ha, four days before harvest or left
unsprayed. One day after harvest, fruit were dipped in a suspension of Cryptococcus
infirmo-miniatus strain YY6 (CIM) at 2.5 × 10(^8) CFU/ml or water,
both containing Monilinia fructicola at 1.0 × 10(^4) conidia/ml.
CIM was a WDG formulation produced by Ecogen, Inc. Treated fruit were
stored at -0.5°C and 2.8°C in air or in modified atmosphere packaging
(MAP). Disease was evaluated after 20 and 42 days at 2.8°C and -0.5°C,
respectively. Preharvest propiconazole, postharvest CIM, and MAP all
effectively reduced brown rot of fruit in cold storage. MAP was most
effective for fruit stored at -0.5°C. Propiconazole combined with CIM
reduced decay more than either treatment alone in most cases. No decay
developed in Lambert or Lapins fruit that were treated only with CIM and
stored 6 weeks at -0.5°C in MAP. Combining these strategies enhances the
prospect for limiting loss of sweet cherry fruit to brown rot during
prolonged storage.
Suppression of fire blight with mixtures of
mechanistically-compatible biological control agents. V. O. Stockwell
(1), L. M. Anderson (1), K. B. Johnson (1), and J. E. LOPER (2). (1)
Oregon State University, Corvallis; (2) USDA-ARS, Corvallis, Oregon 97330.
Publication no. P-2000-0066-PCA.
The biological control agents Pseudomonas fluorescens A506 and Pantoea
agglomerans 252 suppress fire blight of pear and apple when sprayed
onto blossoms during early bloom. Strain 252 suppresses fire blight
through a mechanism of antibiosis: it produces an antibiotic that
suppresses the fire blight pathogen, Erwinia amylovora, and was
required for suppression of fire blight of pear in four field trials.
Mixtures of strain 252 and A506 were rarely superior to the individual
strains in suppressing fire blight in the field. We hypothesized that P.
fluorescens A506 and P. agglomerans 252 were mechanistically
incompatible because A506 produces an extracellular protease that
detoxifies the antibiotic responsible for biological control by 252. To
test this hypothesis, we obtained a protease-minus (Ecp-) mutant of A506
that no longer detoxified the antibiotic produced by 252. Mixtures of 252
and the Ecp- mutant of A506 were as effective or more effective than
mixtures of 252 and A506 in suppressing fire blight in four field trials.
Therefore, mechanistic compatibility between biological control agents is
an important consideration for designing mixtures of antagonists for
management of plant disease.
Epidemic of structural wood rot in southern California caused by
Gloeophyllum. M. F. STONER. Department of Biological Sciences,
California State Polytechnic University, Pomona, CA 91768. Publication no.
P-2000-0067-PCA.
G. trabeum (GT) is a major cause of brown rot of exposed
structural wood in North America. Heretofore in southern California GT has
not been the subject of much special attention. Now, however, GT activity,
populations, and resultant losses have reached epidemic levels, mostly in
warm and relatively moist coastal areas. Compared to dramatically damaging
Meruliporia incrassata, GT is virtually unknown to the construction
and pest control industries, yet its damages are more widespread,
insidious, and costly. Factors creating this epidemic include GT's
characteristics (tolerance to alternate wetting and drying, pronounced
longevity in dried wood, ability to reactivate quickly, compounding
population, wide distribution, and tendency to rot wood from within); wood
factors (increased use of "green" and/or pre-infected woods,
exposure, predisposition by aging and weathering checks or splits, use of
susceptible softwoods); moisture (leaks, condensation, irrigation); and
other supports (termites, paints that seal in moisture, exponential
increases in susceptible structures). The epidemic points to needs for
complete etiology; better understanding of interactions between specific
fungi with unique behaviors and their supporting environment; holistic
control measures; and public education.
Molecular systematics of citrus-associated Alternaria spp.
G. SU (1), T. L. Peever (1) and L. W. Timmer (2). (1) Department of Plant
Pathology, Washington State University, Pullman, WA, USA; (2) University
of Florida, CREC, Lake Alfred, FL, USA. Publication no. P-2000-0068-PCA.
The causal agent of Alternaria brown spot of citrus has been referred
to as Alternaria citri or A. alternata. Ten new species of Alternaria
were proposed recently (E.G. Simmons, Mycotaxon 70: 263-323) based on the
morphology of citrus isolates collected from brown spot lesions on rough
lemon (Citrus jambhiri) and tangelo (C. paradisi × C.
reticulata) in six countries. None of the isolates was considered A.
alternata or A. citri. In order to test these morphological
species concepts using molecular data, several genomic regions of the
pathogens including the 5' end of the beta-tubulin gene and mitochondrial
large subunit were sequenced and compared to saprophytic isolates of A.
alternata, A. solani and other known Alternaria species.
Phylograms estimated from both regions gave five clades with strong
bootstrap support, including one clade for the citrus brown spot isolates,
saprophytic A. alternata, A. tenuissima and A. gaisen
isolates; two clades for A. solani isolates; one clade for A.
limicola isolates; and one clade for A. infectoria, A.
brassicicola, A. arbusti and A. conjuncta isolates.
These data indicate that all of the citrus isolates belong to one
phylogenetic species.
Using GPS/GIS technology to study a Puccinia sp. as a
biological control of dyer's woad (Isatis tinctoria). S. V.
THOMSON, D. R. Hansen, and B. R. Kropp. Dept. of Biology, Utah State
University, Logan, UT 84322. Publication no. P-2000-0069-PCA.
Populations of dyer's woad (Isatis tinctoria) in Utah are
infected with Puccinia thlaspeos, which is spreading throughout
woad infestations and may be an excellent candidate for bio-control of
this noxious weed. To study the long term effects of rust on populations
of dyer's woad, we are using a Trimble GeoExplorer GPS receiver to record
woad population data and rust incidence and locate survey points on
several rust-infested sites in two northern Utah counties. The GPS data is
graphically illustrated using GIS processing. The woad population
increased from 1997 to 1998 then dropped in 1999, which corresponded with
a similar increase and decline in the incidence of rust in 1998 and 1999
respectively. Whether the fluctuation of dyer's woad populations are
related to rust incidence is not clear, but may be revealed as we monitor
these populations from year to year.
A PCR-based assay using sequenced characterized DNA markers for the
identification and detection of Aphanomyces euteiches. G. J.
VANDEMARK (1), J. M. Kraft (1), R. C. Larsen (1), and M. A. Gritsenko (2).
(1) U.S. Department of Agriculture-Agricultural Research Service, Prosser,
WA 99350; (2) Washington State University-IAREC, Prosser, WA 99350.
Publication no. P-2000-0070-PCA.
PCR products were identified that were amplified only from isolates of Aphanomyces
euteiches or A. cochlioides. The products were cloned and
sequenced, and the data used to design pairs of extended PCR primers to
amplify sequence characterized DNA markers. The primer pair OPC7-FS-30 and
OPC7-RS-25 amplified a single 1332 bp product from all isolates of A.
euteiches that was not amplified from any other fungal isolates
tested. A single 718 bp product was selectively amplified only from all
isolates of A. cochlioides using the primer pair OPB10-FS-25 and
OPB10-RS-25. A. euteiches was detected in pea roots one day after
inoculation with a zoospore suspension. PCR also detected A. euteiches
in the organic fraction of field soil samples. Both pairs of extended
primers were used in a multiplex reaction to unambiguously discriminate
between A. euteiches and A. cochlioides. Both pairs of
primers could be used in two-step PCR reactions in which annealing and
extension was done in a single step at 72 C. This reduced the time
required for amplification of the diagnostic PCR product and its
resolution by electrophoresis to less than three hours. We currently are
developing methods to quantify the amount of A. euteiches present
in infected plant roots through the use of fluorescent detection with
quantitative PCR.
Ophiostoma floccosum scytalone dehydratase gene
restores the pigmentation and pathogenicity of Colletotrichum
lagenarium melanin-deficient mutant. H. L. WANG, S. H. Kim, and C.
Breuil. Chair of Forest Products Biotechnology, Dept. of Wood Science,
University of British Columbia, Vancouver, BC, V6T 1Z4, Canada.
Publication no. P-2000-0071-PCA.
O. floccosum is one of the major sapstain fungi reducing the
value of lumber and logs due to wood discoloration. The black pigment
produced by O. floccosum was identified as melanin. To control the
pigmentation on wood, it is necessary to understand the melanin
biosynthetic pathway in this fungus Preliminary works on melanin
inhibition by tricyclazole suggested that this fungus is likely to use the
DHN pathway. Thus, we cloned a dehydratase gene encoding a key enzyme of
DHN melanin biosynthetic pathway from O. floccosum using
degenerated oligonucleotide primers and PCR approach. We sequence 1.5 kb
of nucleotides from a genomic phage clone containing 6.5 kb insert. DNA
database searches showed that the determined sequence shared high sequence
identities with other fungal scytalone dehydratase. An open reading frame
of 651 nucleotides was found to encode a putative protein of 261 amino
acids. Two introns were found in the gene. To verify the function of the
cloned gene, we complemented the C. lagenarium mutant 9201Y
defective in scytalone dehydratase activity with the O. floccosum
gene. Melanin production and pathogenicity to cucumber leaves were
restored in the complemented mutant. Consequently, we concluded that O.
floccosum use the DHN pathway to synthesize its melanin.
Pycnidia produced by Phaeoacremonium chlamydosporum on grape
wood in culture. E. C. WHITING, W. D. Gubler, and D. M. Rizzo. Dept.
of Plant Pathology, University of California, Davis 95616. Publication no.
P-2000-0072-PCA.
Decline of young grapevines was first reported in major production
regions of California in 1994. Phaeoacremonium spp., associated
often with declining vines, cause dark streaking in vascular tissues of
roots, root crown and spurs. The fungus is classified as a hyphomycete.
However, we have produced pycnidia of P. chlamydosporum on grape
wood in culture. Autoclaved cane wood shavings were inoculated with P.
chlamydosporum and pycnidia formed after one month. Pycnidia were
dark, complete, superficial, and were separate or sometimes grouped. They
were globose to subglobose, or broadly ellipsoidal, and were 113-190
microns(um)in diameter. After two months, a white spore mass was visible
as ooze on several pycnidia. Conidial dimensions, based on 50 spores,
ranged from (2)2.5-3(3.5)by(x)1-2 microns(um). Conidia were hyaline,
subglobose to oblong in shape, and were consistent with sizes reported for
conidia of P. chlamydosporum, i.e.
(1.5)3-4(4.5)by(x)1-1.5(2)microns(um). Colony morphology from germinated
conidia was similar to P. chlamydosporum. This finding is important
in the biology and taxonomy of the fungus, as well as in understanding
inoculum dispersal.
Assessment of Swiss needle cast disease development: I. Comparison
of biochemical, molecular, and visual methods to quantify Phaeocryptopus
gaeumannii in Douglas-fir needles. L. M. WINTON (1), D. K. Manter
(2), E. M. Hansen (1), and J. K. Stone (1). (1) Department of Botany and
Plant Pathology, (2) Forest Science Department, Oregon State University,
Corvallis OR 97331. Publication no. P-2000-0073-PCA.
Swiss needle cast is a defoliating disease caused by Phaeocryptopus
gaeumannii that has been shown to be associated with growth loss of
Douglas-fir. A recent epidemic along the Oregon Coast has prompted efforts
to quantify P. gaeumannii colonization of foliage. Direct
observation of fruiting body abundance on needle surfaces has proven to be
well correlated with needle retention but is laborious. Recent advances in
technology have suggested biochemical and molecular methods that may
provide an indirect means of estimating fungal biomass within host tissue.
In this report we compare four methods to quantify infection levels of P.
gaeumannii: fruiting body density, ergosterol content, DNA probe
hybridization, and Taqman quantitative PCR. While all four techniques were
significantly correlated, fruiting body density and quantitative PCR, the
two methods unaffected by the presence of other needle fungi, had the
greatest correlation (r =. 76). In addition, we compared nine field plots
having a range of disease severity using all four methods. Each method
provided overwhelming evidence that the sites differed in fungal
colonization. However, only fruiting body density and quantitative PCR
consistently separated the worst from intermediate sites as previously
estimated by needle retention and growth measurements.
Cultivar resistance in relation to distribution of scald barley
caused by Rhynchosporium secalis in Alberta. K. Xi (1), T. K.
Turkington (2), J. H. Helm (1), K. B. Briggs (3), J. P.Tewari (3), and P.
D. Kharbanda (4). (1) Alberta Agriculture, 6000 C & E Trail, Lacombe,
AB T4L 1W1; (2) Agriculture and Agri-Food Canada, Lacombe Research Centre,
6000 C & E Trail, Lacombe, AB T4L 1W1; (3) Dept of Agricultural, Food
and Nutritional Science, University of Alberta, Edmonton, AB T6G 2P5; (4)
Alberta Research Council, Vegreville, AB T9C 1T4. Publication no.
P-2000-0074-PCA.
Commercial barley cultivars and differentials with varying levels of
scald resistance were evaluated for scald reaction from 1997 to 1999 at
various locations in Alberta. The Rh gene in cv. Hudson, Rh2 in Atlas and
Atlas 46, and Rh9 in Abyssinian and Kitchin were resistant at all
locations and years, and can be used as sources of resistance by Western
Canadian breeding programs. Cultivars Modoc and Trebi were intermediate in
reaction to scald and, thus, the Rh4(^2) and rh6 genes in these two
differentials may not represent effective sources of resistance. Scald
reaction of commercial cultivars was significantly different among
locations, suggesting a more complicated genetic basis of resistance in
commercial cultivars compared with the differentials. The resistance in
commercial cultivars AC Stacey, CDC Dolly, Kasota and Seebe held up at
most locations. Resistant cultivars CDC Guardian and CDC Earl became
increasingly susceptible at Calmar, Lacombe and Trochu. Cluster analyses
over years and locations showed that disease reactions of 33 commercial
cultivars were divided into five groups. Each group tended to include the
same locations over different years, suggesting an uneven distribution of
scald pathotypes in Alberta. Consequently, scald management via the choice
of cultivar may be location dependent.
Molecular detection of Stenocarpella maydis in maize. Z.
Xia and P. N. Achar. Department of Microbiology, University of
Durban-Westville, Private Bag X 54001, Durban 4000. zxia@pixie.udw.ac.za
& pachar@pixie.udw.ac.za. Publication no. P-2000-0075-PCA.
Stenocarpella maydis (Berk.) Sutton is the most prevalent ear rot
pathogen of South African maize (Zea mays). Ear rot is a major
disease affecting the successful cultivation of maize, since it directly
influences yield, grade and price of final product. The genetic
relationship of 34 isolates of S. maydis from different geographic
regions in S. Africa was analyzed by random amplified polymorphic DNA
(RAPD) and ribosomal DNA markers. The two genetic groups were found by
using 3 UBC primers and correlated to cultural morphology of isolates. Of
all the isolates tested, 79.4% were clustered into RAPD Group (RG I),
those isolates did not sporulate on PDA at 25°C for 10 days. The
remaining isolates designated the RAPD group II (RG II), which sporulated
on PDA at 25°C for 10 days when compared to RG I. Coupled with RFLP of
PCR products, two distinct genetic groups exist among S. maydis
isolates from South African maize. Ribosomal DNA (rDNA) was amplified
using PCR with the universal primers internal transcribed spacer (ITS) 1
and ITS 4. ITS regions of rDNA were sequenced. PCR products were subjected
to sequence directly or cloned with PCR cloning kit (Stratagene) before
sequencing. The sequence of ITS region are similar to that of Phomopsis
spp. with approximately 80-90% similarity. S. maydis specific
primers have been designed. The sequences of the P1 and P2 primers are GTTGGGGGTTTAACGGCACG
and GTTGCCTCGGCACAGGCCGG, respectively. The primer pair P1 / P2
permitted a sensitive and S. maydis specific detection and thus can
be for routine detection in maize seeds.
Identification of Phytophthora spp. in irrigation water in
the Wenatchee River Valley. F. YAMAK (1), T. L. Peever (1), and G. G.
Grove (2). (1) Department of Plant Pathology, Washington State University,
Pullman,WA; (2) Tree Fruit Research and Extension Center, Washington State
University, Wenatchee,WA. Publication no. P-2000-0076-PCA.
Phytophthora spp. which contaminate irrigation water in Eastern
Washington cause sprinkler rot of apple and pears. Water from four canals
was sampled for Phytophthora spp. in Wenatchee in 1999 using pears
as bait. Among the 197 isolates obtained, only 37% produced oospores or
sporangia but could not be identified to species. Fifteen morphologically
distinct isolates were chosen for molecular analyses. ITS1, 5.8S, and ITS2
regions of rDNA were amplified by PCR and digested with three restriction
enzymes. Restriction digestion patterns were compared among these isolates
and with ten known Phytophthora spp. Seven different restriction
patterns were observed among the selected isolates and patterns did not
fit with that of the known species. ITS regions of 11 isolates, chosen
based on restriction pattern and morphology, were sequenced and variation
was observed among them. PCR amplification, restriction digestion and
sequencing of ITS will be performed for all of the sampled isolates to
facilitate their identification.
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